rs252170527 SNP Detail

Summary

• ID
  rs252170527
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTAGAGTT CTAGGTCTTA
  CCCCATCTCC CTAGAAACCC AGGCAATGAC CTGTGAATTT GTGTGCCATG CCTGCCCCTC
  CCCCATGCTC CATTCACCTC AGTTTTAGTC TGGTAAAGTC GCAGGGCCAC GGAGAGTGGC
  AGCAGCTGGT TGTACTTGCT GGGTTTGCAC AATTGCAGCT GTGCCCTGTA GCCCTGCCAA
  Y
  GCTGCCATCT GGAGGTTAGC AGTGCCCCCT GGTGGCGCCT GAGAATCAAG AGTCACGGGG
  ACCTGGGTAC AGAAAACTGG ACAGGCACAC TGATCCACCA CATGACTTCA GGGCCTCCCA
  GTCTCTCACA ATGTCCAGCA CCCAGCTCAG AGAACAGAAT CTAGATGTAG AGAACCCGAG
  GACATGGGGA AAAGTCACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505138	CHEV_8_13214084	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252170527					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264084 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	4 bp upstream
Rr368495	regulatory region 368495	248 bp downstream
Rr368496	regulatory region 368496	within coordinates
Rr659886	regulatory region 659886	579 bp distal
Rr659887	regulatory region 659887	621 bp distal
Rr659888	regulatory region 659888	within coordinates
Rr659889	regulatory region 659889	within coordinates