rs252200451 SNP Detail

Summary

• ID
  rs252200451
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44777581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTATGAA GTGCCACACT
  ATGCATCCCA ATCCTGCCCC TGCCTCCAGA GCGCTGGGAC GGTTGCAGAT GCTCAACCTA
  CAGCTGCAAT CTCCTTCCGA GAATCATCTG CCTTCTCAAG AAAGAGACCT ATGGATGGGG
  CTGGAGATGA GGCTCAGTGG TAGAACACTT GCCTAGATAT GCAAGTTCCA TCCAGACCTA
  S
  AAAGTAATAA TGAATAGCAA TAGGAAGAGG AGGGAGAAGG AGGGGGAGGA GGAGGAGAAG
  AGGGAGGAGG AGGAGGAACT GAGCATGATA GCCCAGGCCT GCAATTCCAG ACTGAGAGAC
  TGAGGGAGGA GATCCTCTCG TGCCACGCCA GCCTGGCCTC TGTAATAAGG CCCTCTGTCC
  ACAAAATTAA AAAGAATTGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330195	CHEV_13_44719474	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252200451					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44777581 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	within coordinates
Rr283673	regulatory region 283673	within coordinates