About   Help   FAQ
rs252231602 SNP Detail
Summary
  • ID
    rs252231602
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr10:118689399 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      ACCTGTTAT AGAAAGCAAG GAAAGACACG
    ATCTTTTAGT TTGTAAAAAC TGGTTTATTT ACAATTTGGT ATTTTAAAAC TGTATCTGAA
    ATGatatgtg tatatatata tatacatata tatatatata tatatatata tatatatata
    Y
    atatataCCC ATCCCTGGGA AGTAATCTAT ATTTATTTAA ATATGGAGGC AAAGGGTAGA
    AAATCTGAAT AAATCTTAAG AGATTTATCT ATTGCTACCA ATCTGTGAAT TTTAACTTTT
    AGTCCCCTGA GAATTAATGT GTCAAAAATA                                 
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss323503905 CHEV_10_118290550 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs252231602 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr10:118689399 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm67702 predicted gene, 67702 within coordinates
Rr226050 regulatory region 226050 599 bp distal
Rr226051 regulatory region 226051 203 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory