rs252337542 SNP Detail

Summary

• ID
  rs252337542
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60630128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACAAATAT GTAaatataa tataatataa
  tataatataT GTATAGTAAG TATGTGTGTG TGTGTGTATA cctccattct ttggcttgtg
  gctccttctc ttatgctcaa agcccatgat actggaccaa gtccttatac ttccaattct
  W
  ttgttctacc aacctgttag cctcttttcc cattaatgat caactttata agattgtatt
  aggccaacct ggataatcca ggatcattgc cttattttaa gttctgctgc ttatgaatca
  gaattatatc tctagtctta attctcctct                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324986535	CHEV_15_60589834	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252337542					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60630128 () rs orientation: forward

Symbol	Name	Function Class
Gm48947	predicted gene, 48947	1952 bp upstream
Rr303268	regulatory region 303268	1473 bp proximal
Rr313850	regulatory region 313850	1474 bp proximal