rs252342584 SNP Detail

Summary

• ID
  rs252342584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4558984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTCTACA AATGTCCACA
  GTGTTTATTT TGTTTTGTTT TGAGATGGGG TCCCTAATTG AACCTGGAGC TGGCAGTCTC
  AGCGAGGCTG GTTGGCCGGC AAGCTCCCAT GCCCACTTGG ATCTCCCATC TCTGCCTTCT
  TAGCACTGGG ACTACAAATG TAACTGGCCA GCTTTTTCTG TGGTGCTAGG GATGAGACCT
  Y
  GGGTCCTCAT GCATATGCAG CAAATATTTT ATCCACTGAG CCATCTCCAT CGGTTCCCTG
  TGTCCAATCT CCCTACCCAA CCCCTGGCTG TCCTGGAACT CACTCTGTAG ACCAGGTTGG
  CCTCAGAGAT CCTCCTTGCC TCTCCTGCCT CTGCCTCTGC CTCTGCCTCT GCCTCTGCCT
  CTGCCTCTGC CTCTGCCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873960	CHEV_12_4515792	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252342584					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4558984 () rs orientation: forward

Symbol	Name	Function Class
2900045O20Rik	RIKEN cDNA 2900045O20 gene	within coordinates
Tssr112556	transcription start site region 112556	1744 bp downstream