rs252364696 SNP Detail

Summary

• ID
  rs252364696
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24241333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTAGAAT GAGAGAACTG
  ACTTCCCTTG ACTATTCCCT GTAGATGTGC AGGGAGGAGA GAGGGGAGAG GGGAGAGGGG
  GAGAGGGGGA GAGGGGGAGA GGGGGAGAGG GGGAGAGAGA GAGAGAGAGA GAGAGAATGA
  GTGTGTGTGT GTGTGTGTTT GTGTGTGTGT GCGTGTGTGT GTGTGTAGAA CAGTTAAACT
  S
  CAGTGGTACC AAGCAGGGGA ACCTCAGGCT TGGTGAGTGG AGATTCTGGG GGATTCTATA
  AGCACCAACT AGTCTTACCA CAAGGCTTAA ATCCCATGGG TCTCAAGCTT TTCTGAGGTC
  AAGACCTCAA TTTTCTTCAT TCTAACTCTT TATCTTCAAA CAGTGCTTTG GGCAAACATG
  CCTTACCACC TAAACTTGGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294182	CHEV_13_24149219	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252364696					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24241333 () rs orientation: forward

Symbol	Name	Function Class
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
D13Ertd224e	DNA segment, Chr 13, ERATO Doi 224, expressed	549 bp proximal
Tssr121764	transcription start site region 121764	1939 bp downstream
Tssr121765	transcription start site region 121765	1970 bp downstream