rs252368269 SNP Detail

Summary

• ID
  rs252368269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119799108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTTTCTG TAACACTGCT
  GTCGATGTCA CATGCACTGA TCTAAAACAC TTCCCCCAGG TTCCTACCCT TTCCTATAGG
  GACACCAGGT TCCTTTTCTC ATGATCTGTT TCACAACTGT TTTTGTTCAA ACAGGTTTAG
  GAGCTAGGTC TGTTCTGGGA GAGCTTTGCC GTAAAGGGAT TGCGTGGTCA CGTTTTGTCT
  R
  TCTCCACTTG ACCTCCACAA ACAAGACAGC CCAGGACTCG GCCCTATGGC CCTACATAGG
  AGCCGGGAAG GCCTGTCTGA TCAGGGCCTG AGTCCGTGGA GGAGTCTGTA GAGGTGATGA
  AGCTCCCACC AAGTGCCCTA AATTACCAGA GAAACCTCTC AGAACCTTTG GAAGAGAGAC
  ACAGGATGCT GCACCCCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223754	CHEV_9_119879160	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252368269					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119799108 () rs orientation: forward

Symbol	Name	Function Class
Csrnp1	cysteine-serine-rich nuclear protein 1	1121 bp downstream
Rr688588	regulatory region 688588	within coordinates
Rr688589	regulatory region 688589	876 bp proximal