rs252422712 SNP Detail

Summary

• ID
  rs252422712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83327142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTT CCTCTCCCTC CCTCCCTCTA
  R
  GATCTCATTT ATAGCCCAGG CTGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323767159	CHEV_11_83249818	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252422712					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83327142 () rs orientation: forward

Symbol	Name	Function Class
1700020L24Rik	RIKEN cDNA 1700020L24 gene	1378 bp upstream
Tssr3609	transcription start site region 3609	1410 bp upstream
Tssr103697	transcription start site region 103697	1330 bp upstream
Tssr103698	transcription start site region 103698	1339 bp upstream
Tssr103699	transcription start site region 103699	1362 bp upstream
Tssr103700	transcription start site region 103700	1393 bp upstream