rs252508638 SNP Detail

Summary

• ID
  rs252508638
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44380684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACTGAGCC AGTCTAGGTT TTAACCACTG
  TAGAACACGC CCACGGTAAT CCTGACTCTG GAGGAGGGTG GACAAGGACA TCAGAAGTAG
  TCACATAGCT CGACGGAGTA AGCGGACCAC GGGCGTgtgc gtgcgtgcgc gcgtgcgtgc
  K
  tgcgtACTGG AGAGCTGGTC AGGCTGGACG GAGGCCCCGT GACTGGACAC AGGCAATTTG
  GAACCTTGTT AGATTATAAG TGAGTTAAGA TGAAAGAACA TTTGGAACCT TGAGAAGAGG
  TAAAGCGACA ATAGGAATAA AATTTACTAA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100985	CHEV_4_44393556	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252508638					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44380684 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	within coordinates
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	1117 bp proximal