rs252568640 SNP Detail

Summary

• ID
  rs252568640
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117641963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTCTGTC CCCAGAGCCA
  CAAACACAAA AGTCAATTTA GTTTACAGAT CAAGAGCAGA AATTGACTTG AAAAATACCT
  TGTGAGTGCA AATTTACTGT CATCTAAAAG CAAATTATGT GCGTTCTAAA AATAGAAGTG
  TGTTCCGAAG CACGGAAAGA TGGGCCCTGA AGCTTGGCCA TTCGAGGGAC GCCCTTGAAG
  W
  CTGCTTAGAC TCTTGGGTCG CTCAGCAAAG GACAGTAAGT AAATCCATGC TTCCGAATCC
  ACCCAGGCTG CCCATTTGCA ATTGAAAACG ATGGAGTTTA GTCTTTAGGA AAAGCTGACG
  ATCCTAGAAG AGTGCTTTTG CTTCTTTGTC CTTCACAAGA CTGAGTTAGC TGCATAAAAA
  AGGTTGAATT TCAGGTAATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499631	CHEV_10_117243114	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252568640					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117641963 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	563 bp distal
Rr218194	regulatory region 218194	1838 bp proximal
Rr221673	regulatory region 221673	253 bp proximal
Rr225990	regulatory region 225990	963 bp distal
Rr385360	regulatory region 385360	within coordinates