rs252610748 SNP Detail

Summary

• ID
  rs252610748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117550541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGGGGGG ACAGGGCAAA
  AGGCAAGCAG GCATGCACTG CAGTAGTAGC TGAGAGCTTA CATTCTTATC TCAACCTGTG
  GGTTGACCCT TTGGGGTCAA ATGACCCTTT CACAGGGGTT GCCTAAGACC ATCAGAAAAC
  AGAGATATTT ACATGTCATA ATGAGGAATA AAACCTTAAA AATAAAAAAA TCTCCCCAAC
  Y
  ACTATTGCCA ATGCCAAGAA GTGCTTCCTG ACAGGAGTCT GGCATGGCTG TTCTCTGAGA
  GGTTCTACCA ACACTTGACC AAATACAGAT GCAGATACTC ACAGCCAACC ATCGGACTGA
  GCCCGGAGAC CCCAGTGGAT GAGCTAGGGG AAGGACTGAA GGAGCTGAAG GAGATTGCAA
  CCCCATAAGA AGAACAATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323498916	CHEV_10_117151692	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252610748					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117550541 () rs orientation: forward

Symbol	Name	Function Class
Gm66624	predicted gene, 66624	1327 bp downstream
Gm67727	predicted gene, 67727	902 bp upstream
Rr212986	regulatory region 212986	541 bp distal
Rr212987	regulatory region 212987	1060 bp proximal
Rr225986	regulatory region 225986	1261 bp proximal
Tssr99470	transcription start site region 99470	602 bp downstream