rs252754837 SNP Detail

Summary

• ID
  rs252754837
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84738894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGT GCTGCCAAAG TGCCCGGCGA
  Y
  CCTCCCTGGA CCCCGGTCCC CTGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325039645	CHEV_15_84685123	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252754837					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84738894 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7469	CpG island 7469	within coordinates
Phf21b	PHD finger protein 21B	within coordinates
Tssr135727	transcription start site region 135727	377 bp downstream
Tssr135728	transcription start site region 135728	400 bp downstream
Tssr135729	transcription start site region 135729	437 bp downstream
Tssr135730	transcription start site region 135730	481 bp downstream
Tssr135731	transcription start site region 135731	1327 bp downstream
Tssr135732	transcription start site region 135732	1350 bp downstream
Tssr135733	transcription start site region 135733	1372 bp downstream
Tssr135734	transcription start site region 135734	1402 bp downstream
Tssr135735	transcription start site region 135735	1419 bp downstream
Tssr135736	transcription start site region 135736	1848 bp downstream