rs252782581 SNP Detail

Summary

• ID
  rs252782581
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:90629913 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC TCCCCCACCG GCAGATTATA
  R
  ACTCTTAAGA GTTTGTTTCT TGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325276381	CHEV_16_90833270	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252782581					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:90629913 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8431	CpG island 8431	1138 bp distal
Eva1c	eva-1 homolog C	within coordinates
Rr519213	regulatory region 519213	1902 bp distal
Rr519214	regulatory region 519214	223 bp proximal
Tssr139316	transcription start site region 139316	1875 bp downstream
Tssr139317	transcription start site region 139317	1801 bp downstream
Tssr139318	transcription start site region 139318	248 bp downstream