rs252795040 SNP Detail

Summary

• ID
  rs252795040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:146441284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGGGAGGG AGGGAGGGAG GGAGGGAGGG AGGGAGGGAG
  GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAAACTG
  Y
  CACATTAATA TCTAGCAGAC ATGTTCAATC CATGGCCCAC TAACCACGTG TGCCCCGATA
  GCTATGAATG CCCAATACAA AACTGTAAAT TTACTTAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322080837	CHEV_6_146488308	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252795040					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:146441284 () rs orientation: forward

Symbol	Name	Function Class
Rr134091	regulatory region 134091	484 bp distal
Rr139420	regulatory region 139420	284 bp distal
Rr400056	regulatory region 400056	1251 bp downstream