rs252854353 SNP Detail

Summary

• ID
  rs252854353
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13820958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTTATTC CACTTTGGAA
  TAGTGATTAT TTGGTTCTAT TTGGTTCTCC ATTATAAGTT CTGTTTGGGA GTTCCTGAAT
  GGATGGCTCA GCAGTTAAGA GCCATCTTAA TTTCTCTTGA CTAGGTTCAG TTTCCAGTAG
  AGCTCACAGC TGCCTGTACT TCCAGCTTTG GGGAATCAGA TGTCTGCTTT TGGCCTTCAC
  R
  GGCTCCTGCA CACATGATAC ACTAGTCATA TGCATGTATT TAATTAATTA ATTTCTTTTT
  TTAAATTGCT GTCCTCTGAT GGGGTATTGT TCTTATAGTT TTGTAAACTT AATTTTCTTT
  AGTTCTTTGA ATATTATCCT AGCTTATTTA AAGTATTGTC TTTTAAGTCC AGTATCTCCT
  CTTCTGCTAG GACGGTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322509735	CHEV_8_13770958	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252854353					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13820958 () rs orientation: forward

Symbol	Name	Function Class
Cdc16	CDC16 cell division cycle 16	within coordinates
Gm46032	predicted gene, 46032	within coordinates
Tssr76425	transcription start site region 76425	408 bp upstream