rs252905242 SNP Detail

Summary

• ID
  rs252905242
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:21398231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aatcccagc actagggagg cagaagcagg
  tgggtttctg agttcaaggc cagcctggtc tacagagtga gttccaggac agccagggct
  acacagagaa accctgtcta gaaaaaacaa aaacaaaaac aaacaaacaa acaaaaaacc
  M
  gaacaaacaa acaaacaaaa aacGGTTGCC AAAGTAGTAA ATCCAGGTCT TCTTGCTTCA
  CTATCCTAAA TTCCTTTACC TTTCCATTTT ATTGCCCTTT TCAGACTTTA AACCCTGTTC
  ATCTTTGGAC TCCTCATTAT TGAAGCAGCC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319656534	CHEV_1_21318088	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252905242					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:21398231 () rs orientation: forward

Symbol	Name	Function Class
Gm71569	predicted gene, 71569	within coordinates
Gm71652	predicted gene, 71652	1382 bp upstream
Rr408408	regulatory region 408408	943 bp distal