rs252934180 SNP Detail

Summary

• ID
  rs252934180
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142016743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC AGAAGGCAGG AAGGCTGCTT
  R
  CTGTGTACCA CTCCCGAGTT CCCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471361	CHEV_7_149648911	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252934180					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142016743 () rs orientation: forward

Symbol	Name	Function Class
Lsp1	lymphocyte specific 1	within coordinates
Rr166987	regulatory region 166987	342 bp distal
Rr166988	regulatory region 166988	within coordinates
Tssr2454	transcription start site region 2454	1492 bp upstream