rs252935641 SNP Detail

Summary

• ID
  rs252935641
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116252073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATGTTCT TTGGGCTTAA
  ATGAATGCAT GTACTTAATA TAAATCACGA GTATCAAATT GACAAATGAA AACTTGGGTT
  GACTACAGTG TCCACCTCCT TTTATTCCAG CACAGCCATA TGCACTCATG AGCTCTTAGG
  GTTTATGTGT TCTTTATCAT CAGTTAATCA GAGATAATTG GATGAGCATA AGAACAGACT
  K
  CATCGTCCTC TGTGTGATGC CAACACGACG ATTTTTTCTC TCATTCCTGG TTTCATGGTA
  CCCGGCACTT CAGAATAGTT TCTGTGTTGC TAAGACAACA AGGATACTGC AAAAGAAAAT
  GGGAACTGAA GTCAAGGCCC TGCAACAGCA GCCTCAAAGG ATGTCATAAA TAGTGTGCGC
  CAGGCTCTAT TCACAGTGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323488213	CHEV_10_115853224	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252935641					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116252073 () rs orientation: forward

Symbol	Name	Function Class
Gm67349	predicted gene, 67349	within coordinates
Kcnmb4	potassium large conductance calcium-activated channel, subfamily M, beta member 4	1693 bp downstream
Kcnmb4os1	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	1953 bp upstream
Rr439316	regulatory region 439316	4 bp proximal
Rr439317	regulatory region 439317	1980 bp proximal
Tssr95869	transcription start site region 95869	1880 bp upstream
Tssr95870	transcription start site region 95870	1949 bp upstream
Tssr95871	transcription start site region 95871	1971 bp upstream