rs252940232 SNP Detail

Summary

• ID
  rs252940232
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116993045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGGCCTGT TTCTTTTTTT
  TTTTTTCAAG TTTTTAGATC TCATTTTATT GTATGTATGT GAGTATACTG TCGCTGTCTT
  CCGACACACC AGAAGAGGGC ATCGAATCCC ATTACAGATG GTTGTGAGCT ACTATGTGGA
  TGCTGGGAAT TAAACTCAGG ACTTCTGGAA GAGCAGCCAG TGCTCTTAAC CTCTGAGCCA
  Y
  CTCTCCAGCC CATAGTGGTT TTTATTTTAT TTTTATTTTT ATTTTTATTT TATTTTAATT
  TTATTTTTAT TTTATGTGCA TTGGTGTTTT GACTTCACAT ATGTCCGTGT GAAGGTGCCA
  GACCCCTGCA ACTGGAGTTA CCTGCACTTG TGAGCTGCCA TGTGGGTGTT GAGAATTGAA
  CCCAGGTCCT CTGGAAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323494379	CHEV_10_116594196	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252940232					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116993045 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	89 bp upstream