rs253045571 SNP Detail

Summary

• ID
  rs253045571
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:42266946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGAAGTGG GGAGTCGTAC CCTGGCCTGA
  GGTCTTCAAA AGAGCCAGGG GCAGTGTGAC CCCGAGGAGG ACCCACGGGG TCGCAGAAtc
  tatggttctc agtctccctg tctgcaaagc atgcggcaga actagaagac ctctcaggtg
  Y
  cttGGCACTA GCTGCTTGGG GAGTCTGTTA GTGCTGATGG AGACTGTCTA GAAAAGTGCC
  GTGGCTTCCA GCAGCCTCTG CTCTGTGCGG CCCAGCCGAC CTCATGCCTA CCCAGCTCTA
  TTTACTTTAT TTATATCTTT GGCAATGATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325811986	CHEV_19_42352997	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253045571					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42266946 () rs orientation: forward

Symbol	Name	Function Class
Gm34347	predicted gene, 34347	1143 bp upstream
Mir3085	microRNA 3085	1575 bp downstream