rs253115988 SNP Detail

Summary

• ID
  rs253115988
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116251871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGGAGAGG GAGAGGGAGA
  GGGAGAGGGA GAGGGAGAGG GAGAGAGAAC ATTAAGAAGT CAAGCTTATC TTCAATGATC
  TTAGTATAAA TAAGGAGCCT CAGATTGAAC TGTTTGGAAA CAAGACATGA AAACTACATG
  TGACTTCATG GATTTCGTGT GTTTATCCTG TTCCCCAAAT CACCCTGTAT CATACAACTG
  Y
  ATGCATGTTC TTTGGGCTTA AATGAATGCA TGTACTTAAT ATAAATCACG AGTATCAAAT
  TGACAAATGA AAACTTGGGT TGACTACAGT GTCCACCTCC TTTTATTCCA GCACAGCCAT
  ATGCACTCAT GAGCTCTTAG GGTTTATGTG TTCTTTATCA TCAGTTAATC AGAGATAATT
  GGATGAGCAT AAGAACAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323488207	CHEV_10_115853022	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253115988					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116251871 () rs orientation: forward

Symbol	Name	Function Class
Gm67349	predicted gene, 67349	60 bp downstream
Kcnmb4	potassium large conductance calcium-activated channel, subfamily M, beta member 4	1895 bp downstream
Rr439316	regulatory region 439316	206 bp proximal