rs253137932 SNP Detail

Summary

• ID
  rs253137932
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:118573171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGGTAGGG ATGGGCCGTA GGGGTCTGCC
  CCGGCTGCCT GGAGTGACAG GGGGTGTGGG GCACGGCCTG GGGAATGTGG TAGGAGAATG
  GCTTCTCTGC AGGAGGGGGC TCAAGCCTGC CACTGCCAAT GCCTGTGGAC ATAAGAGACA
  R
  GAGTTACTAG GAGGCTCCAC CCCTCTGCCA ACTGAGCAAT TATGAAGCTA ATATTTTTCC
  AGAGAGTTCT GCTTAGAATT CTGGAAGCCA AGATCCCATC TACCTCACTG AGACCTGGTG
  TGATATTTAA TTCTATCTGG ATATATTTTA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321925391	CHEV_6_118546228	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253137932					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118573171 () rs orientation: forward

Symbol	Name	Function Class
Cacna1c	calcium channel, voltage-dependent, L type, alpha 1C subunit	within coordinates
Gm38887	predicted gene, 38887	within coordinates