rs253139248 SNP Detail

Summary

• ID
  rs253139248
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:61426543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAAGAAA ACCATACAAA
  CATAAATCCA CTTCTAACCA CAAAAATAAC AGGAACCAAC AATCATTTTG CTGCATACAG
  GAAACATACC TCAGTGACAA AGACAGATAC CACATCAGAG AAAAAGGCCA GAAAAAAATT
  CTGAGCAAAT GTTCCCAAGA AACAAGCTGG AGTAGCAATT GTAATATCAA ATAAAATCTA
  Y
  TTTCAACCAA AATATATCAA AAAGATGAGG AAAGACACAA CACACATCAA AGAAAATAAT
  GCACCAAGAT GATTTTTTAA TTCTGAATAT CTATGCCCCA AATCCAAGGG CATTAACATT
  CATAAAAAAA AACCAACTCT ACTAAAGCTC AAAGCACACA TTGAGCCTCA CACAATAATA
  GTGGGAGACT TCAACACCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324063500	CHEV_12_62480744	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253139248					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:61426543 () rs orientation: forward

Symbol	Name	Function Class
Gm45964	predicted gene, 45964	within coordinates
Rr263931	regulatory region 263931	1026 bp distal