rs253176998 SNP Detail

Summary

• ID
  rs253176998
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97954007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTGCCCC ATAATTACCT
  CTTTTAAAGG TCCTGTCTCC AAATATAGTT TAATTCTGAG CTAGGGCTTC AACATAGACA
  TTTTGGTGGG CAGTATTTAG TCCATAACAT TTTTCCCTTC ACTATGCAAT CGGTGAAGGG
  TTAGGAGTGA GAGGTAAGAG TATATATTTT CTGCTTAAGA TCAGAAATTG GAGATTTCAA
  M
  TTTATTATCT ACACACCCAG CAATGCCTTA GTGGCCAGCA GTACCAATTG CATTAGCTCC
  TTGAGGCCCC ATTTTCTTTC CTCTAAAATA TGCATGTAGC AGGCTGCCTA TTTAGTAAAT
  GTTGATTAAA GCCCTACAGT TTCCTAAGCA CTGTTTTCAG GCTAAGGAAA CAGCAATGAA
  CAAAGTAGAA ATTATCTTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324132339	CHEV_12_99225958	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253176998					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97954007 () rs orientation: forward

Symbol	Name	Function Class
Rr387674	regulatory region 387674	480 bp upstream