rs253201491 SNP Detail

Summary

• ID
  rs253201491
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:53896483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCCTGTCA CAGTTCCAAA CCGTGGCTTG
  CTTTCAGTTC TCTTTCCTCT CTCTTTCCAG TCTAGATGGA GGAGTATGGG CTGTCAGGCC
  GAGTCAACAG AGCTTTCACG TACATTCACC ATGCTACAAC TCTTTGAAAA ATCCCAACAC
  R
  AAGACACCAC GACGGGTAAA TACCCCATGT TCCGCACAGA AGACAGATCT CAGCGCCAGC
  TCGAAGCATT TGTTCTTTCT ATAAATACTT ACATTCATCT AAATTTTAAA AAGAAACATG
  CAAATTAATG CAATAACTCT TGTCTTTTAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320770180	CHEV_3_53792984	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253201491					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53896483 () rs orientation: forward

Symbol	Name	Function Class
Rr576763	regulatory region 576763	292 bp distal