rs253240366 SNP Detail

Summary

• ID
  rs253240366
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACTAGGA AAGAGTTTGA
  AATGAGCAAT CTGCAGAGCA AGATTGAGGA CGAGCAGGCC CTCGGCATGC AGCTGCAGAA
  GAAGATCAAG GAGTTGCAGG TACATCCATA TCTTCTATCC GTCTAATTCA TCAGTAAACG
  AAAAATGATT GACCCAAGAA GCTGAGTTGG TCTTTTCCAC CACCTCCAGG CCCGCATCGA
  A
  GAGCTGGAGG AGGAAATCGA GGCAGAGCGG GCCTCCAGGG CTAAAGCAGA GAAGCAGCGC
  TCTGACCTCT CCCGGGAACT GGAGGAGATC AGCGAGAGGC TGGAAGAAGC TGGCGGAGCC
  ACTTCAGCCC AGATCGAGAT GAACAAGAAG AGAGAGGCTG AGTTCCAGAA AATGCGCAGG
  GACCTGGAGG AGGCCACGCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719224	CHEV_11_67066667	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253240366					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143991 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	633 bp proximal
Tssr3528	transcription start site region 3528	1568 bp upstream
Tssr3529	transcription start site region 3529	1624 bp upstream
Tssr102199	transcription start site region 102199	1430 bp downstream
Tssr102200	transcription start site region 102200	1279 bp downstream
Tssr102201	transcription start site region 102201	310 bp upstream
Tssr102202	transcription start site region 102202	832 bp upstream
Tssr102203	transcription start site region 102203	892 bp upstream
Tssr102204	transcription start site region 102204	1290 bp upstream
Tssr102205	transcription start site region 102205	1508 bp upstream
Tssr102206	transcription start site region 102206	1612 bp upstream
Tssr108532	transcription start site region 108532	1407 bp upstream
Tssr108533	transcription start site region 108533	1255 bp upstream
Tssr108534	transcription start site region 108534	561 bp upstream
Tssr108535	transcription start site region 108535	455 bp upstream
Tssr108536	transcription start site region 108536	879 bp downstream
Tssr108537	transcription start site region 108537	891 bp downstream
Tssr108538	transcription start site region 108538	1393 bp downstream
Tssr108539	transcription start site region 108539	1601 bp downstream
Tssr108540	transcription start site region 108540	1661 bp downstream