rs253268979 SNP Detail

Summary

• ID
  rs253268979
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111935309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTGGTCA TGTTTGTAGT
  TATCCTGGGA TGCATGTGGC TTGTGGATAC ATGCGTGCTT AGCTAATTTC TAAGTAGACT
  GTGAGCCTCC TGAGAGTCAC TGCAAGCAGG GACTGCTGGT CAATTGCAAG GCTCTGGGTG
  CCTTAAAGGT GAAAGCGAGC CAAATTCTTG TGCCCTTACA CCCCACCCCT CCCAGTCAGG
  R
  AGGCACCGAT TGGTGAGCCA AAGCTATGCC TCAACCTCAG CTCTCAAAAC AGCAATACTA
  AGCTGATGCC AGAAAGCTTG CCTTAGCCTG AGAAGTACAG CTTCCTCCAG ACCACCTACT
  TACTCAGAGA CTGGTAGAAA AAGAAGGTGT TTGCATAGCA GGAACTGAAA GAGTAGTAGT
  GAAGCCCTGG AGGTGGGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322412412	CHEV_7_119479616	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253268979					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111935309 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	491 bp upstream