rs253319289 SNP Detail

Summary

• ID
  rs253319289
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95721713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACCTGGG TAAGTTCATG
  CAGACCCTTG GACTGGGGTC TTGCGCAGAT GGCAGTCTGC TTCACCCAAG GAGACCATTT
  CACTATGACT TCTAAAGAGA GGCTCTCACT AGCAGGTAAG CTTTCCATTC AAGAGCGGGT
  CTCTTCTGGA GCTAGCCTGG ACTCCCCATG CAAGCTTCAT TCTTTGCTGT GTGACCCTAG
  Y
  GGGTGACTTG GCTTCCCCGG GGGCTTCTCA TTTGTCCGTT CAGTGGGTCA TGGGCTTTTT
  CTCATGGGTT TTAAAGAAGA TTAAATGTGT TAATGGGGGC TCAGGCCTGT AATATGAACA
  CTTGGGAGGC TGAGGCAGGA GGATGAGAAG TTCATTGCCA GGCTGGGCTA CATAGAGAGA
  CACCATCTCA AAACACAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809829	CHEV_8_97518985	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253319289					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95721713 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78944	transcription start site region 78944	758 bp downstream
Tssr78945	transcription start site region 78945	695 bp downstream
Tssr78946	transcription start site region 78946	652 bp downstream
Tssr78947	transcription start site region 78947	364 bp downstream
Tssr78948	transcription start site region 78948	296 bp downstream
Tssr78949	transcription start site region 78949	282 bp downstream
Tssr78950	transcription start site region 78950	233 bp downstream
Tssr78951	transcription start site region 78951	506 bp upstream
Tssr78952	transcription start site region 78952	598 bp upstream
Tssr78953	transcription start site region 78953	619 bp upstream
Tssr78954	transcription start site region 78954	665 bp upstream