rs253320368 SNP Detail

Summary

• ID
  rs253320368
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:19600722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAGCTCCT GCCTTCAGGC
  CCCAGCCCTG CTTGACTTCC TGTTCTGCCT TCCTCTAGTG ATGATCTATG GTCTGGAAGT
  ATAAGCTGGA TAAACCCTTT CCTCCCCAAC TTGCTTTTTG CTCATGGTGT TTTCATTGCA
  GCAATAGAAA CTCTAGCTAA GACCCCAAAC ATGCACATCT TTATTTCTGA CAGTCTTCTC
  K
  AACTGGCTTT TTAGGGGTGA AAGGTTATTA AAGAAAGGGA AGACAGAGTG GCTGGTCCAT
  TCTCACAAAG TCAGTCATGG TAACCAGGAA CATCATTCTT AGTTCTAATA TTGCAAGCGT
  CGTGCTAGGA AGTCCCTAGA TCCCAGGAAA ATCTGGAGTG TTCCCTAACA TGATTTTAGC
  ATTAAGTCAT TGTGGGAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323588556	CHEV_11_19550725	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253320368					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:19600722 () rs orientation: forward

Symbol	Name	Function Class
D11Hjk21	DNA segment, Chr 11, H. Jockusch 21	476 bp proximal
Gm12027	predicted gene 12027	within coordinates
Rr249245	regulatory region 249245	480 bp proximal