rs253373536 SNP Detail

Summary

• ID
  rs253373536
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84354293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAGATGG AAACATCTTA
  ACTTGAGGAT CAGGAGCAAC ACAGCAGAGA TCTTAACTGA TAAGGGAAGT ACCTTTTGAT
  GGTTAATATT GATTGTCAAG TTGACAGAGT CCAGAATCAC CTAGAAGACA GACCTCTGGA
  CCAAAAAGGA TAGTCTTGCT TAAATTTGTT GAAGTGGGAC GCCCCACCTT CAAAGTGGCT
  A
  ACATCATCCC CAGGGTCCTA TATTGCATAA AAAAGGGGAA ACCTAGCCAC ACATTGGCAT
  TCCTCCCCCT CGCTCACTTG CAGGAGACGA AGTGTGGTCA GGAGCCTAAA TTCCTACTAC
  TGTAATTTCT TTGCCAAGGT GGACTTCTCA AGAACTGGGA GTCCTTTATT TTTTAAGTTG
  TTTTCATTGT TGTTGTTGGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260804	CHEV_16_84557650	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253373536					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84354293 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	877 bp upstream
Rr518505	regulatory region 518505	848 bp proximal
Rr518506	regulatory region 518506	949 bp proximal
Tssr139145	transcription start site region 139145	237 bp downstream