rs253494035 SNP Detail

Summary

• ID
  rs253494035
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192805070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAAGATTCC CGAGCGCAGG CTCCATGCAC
  TCTGCACAGC AAGACACACT AATAATTCTC AGTATTCACC TGAACTAGAG ATGACACAAA
  TGCTACCCCT TGCATGCACA TGACCCTCAG CTCTGTGATG CCCATGTAGT CTGCTGCACT
  Y
  GGGTGATCCC CGGGCCCCCC TCTGTGCTCT CTCACTGAGT AGCAGCAAAG TGAAGTAGGT
  AACTTGCTCA AGGATCCAAA TGACATGAAC CTGCAGAAAA TGCCCAAGAC TACAAAAGCA
  ACACCATCGG GGACACCTAG GCCAACCCAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320200884	CHEV_1_194948956	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253494035					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192805070 () rs orientation: forward

Symbol	Name	Function Class
Rr367086	regulatory region 367086	20 bp upstream
Utp25	UTP25 small subunit processome component	within coordinates