rs253582765 SNP Detail

Summary

• ID
  rs253582765
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70896210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGTGGCA CTCAAGTAGC
  CTTGTTTTGC CTGAGGACCT CTGTCCCAGC AGAACAGTGT AGTACCTATG TCTCTATGGA
  AGGCCTCCTT CCAGTCCATT GCAGTATCTA AAGGCCACTA TACTATACTC TGTCATACCT
  AAAGTCCAGC ATACCATATG TGGGAATACT TACTTCTCAT AAGAGAAAAG AAAGCTTTTG
  R
  ATAGAGCTAT AGCCAAATAT CCTCCCTCAT TCAGGTTTGC CGTCGTGGTG TCACAAAAGA
  ATCCCTTAAC CCGAGACCCT GAGAAACAGC TTCTGTACTC AAGGGCACCA GACCTGCAAA
  CCAAACTAAA GCAAAACAAG AAGACATTCT AACACCATCC CCAAGTGTTC CTGAAGGCAA
  TGCTGAAATA ACTGTGGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416624	CHEV_13_70886969	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253582765					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70896210 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Rr284828	regulatory region 284828	1067 bp distal
Tssr123156	transcription start site region 123156	1991 bp downstream