rs253586663 SNP Detail

Summary

• ID
  rs253586663
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127725517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA AGAGCTGGGA GAAGGATCAA
  S
  GGCCTCAGAG GGGTTAAGAA CTCCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530337	CHEV_10_127326704	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253586663					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127725517 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	831 bp upstream
Rr226507	regulatory region 226507	317 bp distal
Rr226508	regulatory region 226508	within coordinates
Tssr99826	transcription start site region 99826	986 bp upstream
Tssr99827	transcription start site region 99827	898 bp upstream