rs253600232 SNP Detail

Summary

• ID
  rs253600232
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4561531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATTTTCTC TACTTTTTAA
  ATATTTATTA ATTCATTGTG TATGAGCTTC TTGACTGCAT ATATGGCTGT GTGTCATGCA
  TGCCAGTGTC CATAAAGACC AGGGGGAACT GGAAGCCCCA AAGCTGGAAT TACGGATGGT
  TGTGAGCCAC TATTCGGGTT CCGGGAACCT AACCAGGGTC TTCTTCAAGA GCAACAAGTA
  C
  TTTTAACAGG TGAGCCACCT CTCCTGACCC CAATGTATTT TTAAAGTGTC TTAACTTATA
  AATGTCTTTG TTCTGTTACT AGAAATCTTT ATGAAACAGT TACTAGGTAA GAACACGGTA
  CTTGGGATGA CAAATCCACA TTCCTATGCC ACAGTCACTC GTTTTTGGTT CCAGAAAAAT
  CTTTTATTCC CTATGAGTGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873974	CHEV_12_4518339	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253600232					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4561531 () rs orientation: forward

Symbol	Name	Function Class
2900045O20Rik	RIKEN cDNA 2900045O20 gene	within coordinates
Rr265385	regulatory region 265385	1130 bp distal