rs253632170 SNP Detail

Summary

• ID
  rs253632170
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:11504590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTCTTCC CAATCTCTTG
  TCATTTCTCT GTCACCTTTA TTACTATCAT CCCTATTTCA TTTCTTCTTT AGTATATCTT
  ATTTTTTAAT TCTTTATCAT ACTTTAGCAA AACAAAAATC ATATTTCATT GCATATAAAT
  TTCCCAATAA AGAAAATAAG TTTTAAAATG GCAGCTAAGG TACATGGTCG TTCATTCTTA
  Y
  CTGTGGATTG GATCACAATG GTGTTAACTA TGGTATAGGA AACTACAACC TGCTTTAGGT
  TAAGATTTCT TTTTTTTTTT TTCTGTTTCT TCATCTTTAT TTTATTTTTA TTTTTATTTT
  TTTAGGTTAA GATTTCTTAT TTGTCCTGAA TTGCCTCATA ACAGACAAAT GATATGGTAA
  CTTCCTGGCA TTTCCCTGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324264599	CHEV_13_11581971	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253632170					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:11504590 () rs orientation: forward

Symbol	Name	Function Class
D13Ertd463e	DNA segment, Chr 13, ERATO Doi 463, expressed	1587 bp distal
Rr387978	regulatory region 387978	81 bp upstream