rs253639867 SNP Detail

Summary

• ID
  rs253639867
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18996961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATAATGAG ACCTGACTCC CTCTTCTGGT GTGTCTGAAG
  TCAGCTACAG AGTACTTATG TATAATAATA AGTAAATCTT TGGGCTGGAG CGAGCAGGGA
  G
  TGGGCACACA GGGTTGACCG GAGTGAGCAG AGGTCCTAAA AATCTAATTC CCAACAACCA
  CAGGAAGGCT CACAACCATC TGTACAGCTA CAGTGCACT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322116778	CHEV_7_19848385	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253639867					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18996961 () rs orientation: forward

Symbol	Name	Function Class
Tssr70882	transcription start site region 70882	977 bp upstream
Tssr70883	transcription start site region 70883	1433 bp downstream
Tssr70884	transcription start site region 70884	1774 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates