rs253660851 SNP Detail

Summary

• ID
  rs253660851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42064808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCAGAAA TGTTGCTTGA
  TGCACAAAGA CTGTAGTATC TAATTATAGC AGCTCAAACC AAGATTCCCT AGATCTCAAA
  TTGTGTGTGT CCTGAAAACC AGCCCACAGT ACTTTAAAAC TAACATATAA GGCATACACC
  ATAGAACTCA CTTACTTAAG ATCACACATT TCAGAGGAAT TTACCTACAG GGTTAGGCAG
  R
  AACTGGGACA GTTGTGACAG GAGTTTACAT ATTTGTGAAA ACTTAAAGAG CTGAATGCTA
  GAAAAGGTAA ATTTGATTGT CTATAGATAA TCTTGCAACA AATACAACAC TTAAAGATTC
  CACTGAGAGA ATCCACTCAC ATATCACATT AGAGTCATAT GTAGAGGACA TACAACTCAC
  TCACGTATCA CATTAGAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596238	CHEV_18_42091397	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253660851					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42064808 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	776 bp proximal
Prelid2	PRELI domain containing 2	Intron