rs253684963 SNP Detail

Summary

• ID
  rs253684963
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184823952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTATGTTT GCCACCATTC
  AGGCAAAGAG TGCATTCATC ATGTGTTCAA GTCACATGCC GTAAATCAAA TAATATCTTA
  TGTGTCCTCG GGGGGCTTGC TACTTAGAGA ACTTCTCCTT AAACACTTTA TCTGTCAAAC
  ACACATAAGT ATGCAAACAT CGTGTGTGTA CAATGCATTT ATCTTGACTT AAAACTGGAT
  R
  CAACTGTGGC TTCTTGCTTG CTACTAAAAT TCCTCTTTTC TCCCCAAAGA CATAATGGCT
  AAAAGCCACT GTCCTAAATA TCTGCTTGAT TCTCAGACAA GAAGACACCA GTTCCTTGTC
  AGCCACCCCA CATATACAAT GAGCTACTGT CAGTAAGCTC TCTGACGCGT ACGACGACGT
  CTGGCAAACG TGGTTTATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320172328	CHEV_1_186915634	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253684963					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184823952 () rs orientation: forward

Symbol	Name	Function Class
4930433J02Rik	RIKEN cDNA 4930433J02 gene	within coordinates
Gm37662	predicted gene, 37662	within coordinates
Rr372582	regulatory region 372582	within coordinates
Rr425334	regulatory region 425334	81 bp proximal