rs253705017 SNP Detail

Summary

• ID
  rs253705017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176718097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gaaagagaa agaaagaaaA Agaaaggaag
  gaaggaagga aggaaggaag ggggaagaag gggaagaagg ggaagaaggg gaagggcaag
  gggaagggaa aagaaagggg aaggaaaggg gaaggaaagg aaaggaaagg aaaggaaagg
  R
  aaggaaagga aaggaaagga aaggaaagga aaggaaagga aaggaaaAAA ACTGTTATTA
  TTAGTGTCTC TTTTGTCAGT GGCCACATCT AAATGATTGA AGAAAAAGTC TCAAATAATA
  AACACTGTCT AGAGGGGCCC TTAAAACTCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320158154	CHEV_1_178820662	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253705017					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176718097 () rs orientation: forward

Symbol	Name	Function Class
Gm37490	predicted gene, 37490	301 bp downstream
Rr423928	regulatory region 423928	340 bp proximal
Sdccag8	serologically defined colon cancer antigen 8	within coordinates