rs253794651 SNP Detail

Summary

• ID
  rs253794651
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAGGAGA AACCCTAGGG
  CACCGCTTGC TTAGCCTTAC CAAGGACAGT CCCTGTTTTC TTTTTCTTTC TTTTTTTTTT
  TTTTCCGAGA CAGGGTTTCT CTGTGTGGCC CACGCTGTCC TGGAACTCAC TCTGTAGACC
  AGACTGGCCC GGAACTAAGA AATCCGCCTG CCTCTGCCTT CCAAGTGCTG GGATTAAAGG
  M
  GTGCCCCACC ATTTTCGGCT TCCCTGTTTT CAAAGCTCAC CAGCTCTTAC TGTTTGCTAG
  AAATAGTCCC ATTGTCACCC TCCCCTACAC GTGTGTGGAT TACCCTTCCC TGCTCCCTCA
  GTAAGAGCCT GGGAAGTGTT CTGGCTAGGT GTGATGGAGT ACAGTTTCAG TCCCAGTCCC
  AGGAGTGGGA GGGCAGAGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499202	CHEV_10_117185808	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253794651					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584657 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	729 bp downstream
Nup107	nucleoporin 107	1869 bp downstream
Rr439612	regulatory region 439612	1911 bp distal