rs253819269 SNP Detail

Summary

• ID
  rs253819269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:30238579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAATCAC CACTGTTCTT
  TTGAAATCCT GGAAAGGGCA AATCCTTTAG GAAGGGAGCA TGGGGATACA ACAGAGAGGA
  TATGCAAGGG CTGTTGGGTG TTTTTAAAGA TTAGCTATAC ACAGACTTGA TAGTCCCAGC
  ACAGCAGGAG GCTTAAGTCC TGAAGTCAGT GCTTGGACCT ACATGGTCAG GTTGCAGGAC
  R
  GAAGTATCCT GAGCTTACCA TAGAGGAGTC GCTGTTGCAC TGAGGAAGTG AAGAACTCGG
  AATATAAAGG AGATCAGGAC TCCGCACGCA CCTGCTTGTT CTCAGAACTG AATTATGTTC
  TCAACATCTG GGCAGGGTGG AGATGTCCAC CGTGGATGGA TGGATGGTGG ATGTTCAGGA
  TGGTTCAGTC CTGCTATGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324908842	CHEV_15_30168188	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253819269					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:30238579 () rs orientation: forward

Symbol	Name	Function Class
Ctnnd2	catenin delta 2	Intron
D15Mit249	DNA Segment, Chr 15, Massachusetts Institute of Technology-249	920 bp proximal