rs253861815 SNP Detail

Summary

• ID
  rs253861815
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30822746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCCCCATC CTGATCCCCC CAAGGACAGA TGAGGCATAT
  ATGGGATCAA CGTCTTTTGA GGTTTTCTTT TTGCTTTTTT GTTTTGTTTT TTTAGGTTGT
  R
  TGTGTGTGTG TGTGTGTGGT TCTGGCATTG TAATCTTTGT ACATGTGAGG CAGGTGCCTT
  GCTATTGAGC CACACCCCCA TCCCCTTACT GGGTGCTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322139511	CHEV_7_31908340	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253861815					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30822746 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18836	CpG island 18836	1795 bp proximal
Scn1b	sodium channel, voltage-gated, type I, beta	within coordinates