rs253921567 SNP Detail

Summary

• ID
  rs253921567
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39370895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGTGTTT TTTCTGTGAT
  TCACCCTTCC CAATGTACTA GAGAGCCAAG AATCATTCCA GTGTCCTTAG CTAAATTAGG
  CAAAAAAAAA AAAAAAACAC ACAAAAGGAA CCCAAACACA CCAATACTGA AGGAAAAAGT
  TATGTTTTAA TGCTGAAAAG CAAAGAAAAC TGGGTTTAAA TTTCACAGAT TGTGTTTTAT
  W
  AAAAGAAAGA GAAGCCAGAG ATGTTTTGTG GAGTGCAGTA TGTGTGAAGG AAGGGAGTGC
  CTCTGCAGGG TCATGCTGAG GCATCCCTTC CCCCTGAGGT ACCACTCACA GGATGGTATA
  GCATAGAATA GAATTTATTT AGGGCATGGG GAGGGCAGTT GAGGGCATAG TATAGACAGA
  GAAAGGCAGA GAGAGAACAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228541	CHEV_2_39336403	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253921567					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39370895 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	703 bp proximal
Rr373076	regulatory region 373076	897 bp downstream