rs253952440 SNP Detail

Summary

• ID
  rs253952440
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69761081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTGGTCT GCTTGGAGAA TCTTTTCTTC
  AACAGCTCCA ATGCTAATCT AGCTACTAAG AAACTCCAGC ATATAACCCC CAAGGCTACA
  TCCCTACATT GAAGATATCC AACTGGCTTT GTGGTAAATC ACATTGATAT CTAAATTCAC
  Y
  GAAGTATTCC TTTCCCTAAA CCTGCTGGTA CCCATTGTAC ATAGGTACTC GTGAATCATC
  CTTAATATCT TACTCCACCT ACCCTCCACT CAAGTTAAGA GTCCTAAAGA ATCTACCCTG
  TATTCATGTC TGGTTTCAAC TATCAGCATC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319782001	CHEV_1_69768496	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253952440					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69761081 () rs orientation: forward

Symbol	Name	Function Class
Gm70550	predicted gene, 70550	within coordinates
Rr371466	regulatory region 371466	1771 bp upstream