rs254100811 SNP Detail

Summary

• ID
  rs254100811
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:87688984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAG GCATGAGGCT CTTAGTGAGA
  G
  TTCAAGGCCA GCCTGGTCTA CAGAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323773688	CHEV_11_87611660	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254100811					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:87688984 () rs orientation: forward

Symbol	Name	Function Class
Gm11505	predicted gene 11505	within coordinates
Mpo	myeloperoxidase	within coordinates
Rr453904	regulatory region 453904	1986 bp distal
Rr453905	regulatory region 453905	1932 bp distal
Tssr3633	transcription start site region 3633	1819 bp downstream
Tssr3634	transcription start site region 3634	1748 bp downstream
Tssr103997	transcription start site region 103997	1895 bp downstream
Tssr103998	transcription start site region 103998	1750 bp downstream
Tssr103999	transcription start site region 103999	827 bp downstream
Tssr104000	transcription start site region 104000	713 bp downstream
Tssr104001	transcription start site region 104001	687 bp downstream
Tssr104002	transcription start site region 104002	665 bp downstream
Tssr104003	transcription start site region 104003	590 bp downstream
Tssr104004	transcription start site region 104004	568 bp downstream
Tssr104005	transcription start site region 104005	541 bp downstream
Tssr104006	transcription start site region 104006	1731 bp upstream
Tssr104007	transcription start site region 104007	1814 bp upstream
Tssr109976	transcription start site region 109976	1724 bp upstream
Tssr109977	transcription start site region 109977	788 bp upstream
Tssr109978	transcription start site region 109978	778 bp upstream
Tssr109979	transcription start site region 109979	711 bp upstream
Tssr109980	transcription start site region 109980	536 bp upstream