rs254212304 SNP Detail

Summary

• ID
  rs254212304
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106521395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcctttcat cccagtactt gggaggcaga
  ggcgggtgga tctgtagagt ttaaggctcg cctggtccac ataatgagct ccaggtcaac
  caagggctac aatgagagta gaagagacct tgtctcaaCA CCCCCACACA CCTCCCCCCC
  M
  AAAAAAACCT ACCACTACCA CCAACAACAA AAAAACAAAG ACAAACAAAA AAAGAAAGCC
  TACATCTAGA CAAAATAAGT TGCGTGCACA CACAATAATA ATTAACAACA AAAAGACATG
  Tgctggaaat gcagctcagt tggtagcaca                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323186513	CHEV_9_106546527	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254212304					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106521395 () rs orientation: forward

Symbol	Name	Function Class
Gm28111	predicted gene 28111	627 bp downstream
Grm2	glutamate receptor, metabotropic 2	338 bp downstream
Rr686373	regulatory region 686373	680 bp distal
Rr686374	regulatory region 686374	803 bp distal
Rr686375	regulatory region 686375	191 bp distal
Rr686376	regulatory region 686376	1654 bp proximal