rs254225987 SNP Detail

Summary

• ID
  rs254225987
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128784084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATAATGTG CAAACTCAGC TGTCAGGCTT
  TGTGCTCTAG AGAAATTAAT AGATGTGTTG TCATGAAAGA TGCCCAGGTC TGGGTCTTTT
  GTGAtgtctt agtgagggtt accgttgctg tgatgaagca ccatgagcaa aagcaacttg
  R
  gaagggaagg gtttatttgg cttatgcttt gacatcactg tttaccactg aaggaagtca
  ggacaggaac ctggaggcag gagctgaggc agaggccata gagtgttaca gtttactggc
  ttacttctca agatttgctc agccttcttt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319967634	CHEV_1_130752924	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254225987					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128784084 () rs orientation: forward

Symbol	Name	Function Class
Rr372000	regulatory region 372000	810 bp downstream
Rr417836	regulatory region 417836	702 bp proximal