rs254264371 SNP Detail

Summary

• ID
  rs254264371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGCAGGC AGAGCTGAGA
  GTTCTATATC TTCATCTCAA GGCTACTAGT GGAAGCTAGG GTGAGGGTCT TATGCCCACA
  CCCACAGTGA CACACCCACT CCAACAAGGC CACACCTCTA ATAGTGCCAC TCCCTGGGCC
  AAGCATATAC AAACCATGAC ACTCCCTTTA TGTAGGAAGG GCATGCACTA AGCACCTTGT
  R
  CAGTGGGTAC TCTTTTTACA TGACCAGATT ACGATACTAC TCAGGGCAGG GCACCTCACC
  AAGAGAGAAA AGAAAAAAAG CCGTTTTACT GTAGTGGTTC GAATGAGAAC ACAGACATCA
  GGTATTTGAA CCCCTGGTAC CCAGTTGGTG GCAATGGTTG GGGAATCTGG ACGGTGTGTT
  TGTTGGAGGA AGTATGTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325752834	CHEV_19_21671112	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254264371					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573986 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	691 bp downstream
Gm38486	predicted gene, 38486	420 bp upstream
Gm59243	predicted gene, 59243	within coordinates
Rr364167	regulatory region 364167	1416 bp proximal