rs254333394 SNP Detail

Summary

• ID
  rs254333394
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99663505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGACTAAA CTTATTTTGC
  ATTAGGCTAT GCCTAGGTGT GGCCTCCATA GATTCACACA TTTGAACAAG CTTATTGGGA
  CCAGGATGGA ATGTGGTGGT TAGAATATGC TTGGCCCAAG GAGTAACACT ATTAGGAGGT
  GAGCTTTGAG ACCTGTTCCT AGCTGCCTGA GGACAATCTG CTCCTGGCTT CCTATGGATG
  R
  CATATAGAAC TCTCACTTCC TCCTGCACCA TGCCTGCCTG GACACTGCCA CGCATTGATA
  ATTATGGACT GAACCTTTGA ACCTGTAAGC CAGCCTCCAA TTAAATGTTG TCCTTATAAG
  AGTTGCCTGG GTCATGGCTT CTCTTCATAG CAATGAAAAC CCTAAAACAA CAATATAGAG
  TTGTCTGCAG AATATCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325081757	CHEV_15_99596055	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254333394					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99663505 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	367 bp upstream