rs254340976 SNP Detail

Summary

• ID
  rs254340976
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69621007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGTGTCA CGTGGGTCTT
  AAGGTTTTAA CAACTTCACC TGCCTTTACC TGCCTGAGCC TTTACCGTGT TCCCACTCAG
  AACTGGGAAA AGGGAAACTC AGCTGTCCTA TTACTTTCCC GTGGGATGTG GTTCACCCTA
  GGAGTACGTG ATTGTGGGAG GGCCACTGAC AGACAGCTTC AGTCTTCTGA TGTGAAATCT
  R
  ATCTTCTGTG GAAGAAGGCA TGCCCATTTG GAGAACTAGT TAAAGCTGAT TAGAAGTTTT
  AAGTCCGTAG AAGCCGCATG TCAGATATAA AGCTGAAGTT CACCTTGAAC TTTATTTTTA
  GAACTGCACT AATTAGAACA AAGTTAGACT CGTAAAGGCC TCTTCCTTGC ACAGACGGGA
  ATCTACAGCA GAAAGGCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085220	CHEV_12_70675220	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254340976					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69621007 () rs orientation: forward

Symbol	Name	Function Class
Rr257073	regulatory region 257073	807 bp distal
Rr257074	regulatory region 257074	394 bp proximal
Rr403327	regulatory region 403327	311 bp upstream